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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

Apollo 3: Multi-Species Genome Curation

Garrett J Stevens, Kyösti Sutinen, Dario Beraldi, Shashank Budhanuru Ramaraju, Colin Diesh, William Haese-Hill, Peter Xie, Caroline Bridge, Adrien Morison, Angel Leung, Ulrike Böhme, Scott Cain, Nathan Dunn, Toby Hunt, Jane E Loveland, Adam Frankish, Alexie Papanicolau, Stefano Giorgetti, Jon Keatley, Bethany Flint, Lincoln Stein, Robert Buels, Matt Berriman, Ian Holmes

Structural Mechanism and Cellular Restriction of Tau Seeding from Endolysosomes

Eric Herrmann, Shuixia Tan, Kevin M Rose, Richard M Hooy, James H Hurley

Long-term patterns of health services utilization after hospitalization for COPD. A nationwide registry-based study from Norway

Jon Helgheim Holte, Tron Anders Moger, Anne Edvardsen, Trond Tjerbo, Nina Køpke Vøllestad, Ragnhild Hellesø, Alan Hubbard

A multi-omics study reveals pathway-level insights and predictive biomarkers in pediatric TB

Zaynab Mousavian, Mark R Segal, Roger I Calderon, Juaneta Luiz, Esin Nkereuwem, Peter Wambi, Mandar Paradkar, Molly F Franke, Gunilla Källenius, Beate Kampmann, Aarti Kinikar, George B Sigal, Christopher Sundling, Danielle L Swaney, Eric Wobudeya, Heather J Zar, Jeffrey M Collins, Adithya Cattamanchi, Joel D Ernst, Devan Jaganath

Cryo-electron tomography reveals OmpB is required for the Rickettsia parkeri S-layer

Meghan C Bacher, Daniel Serwas, Yan Han, Dominika Borek, Matthew D Welch

Identifying viral infections through metagenomic Next Generation Sequencing of undiagnosed respiratory fevers in Madagascar (2014–2019)

Sophie Lockwood, Hafaliana Christian Ranaivoson, Tsiry Hasina Randriambolamanantsoa, Norosoa Razanajatovo, Vololoniaina Raharinosy, Vida Ahyong, Jean-Michel Héraud, Philippe Dussart, Vincent Lacoste, Cara E Brook

User experiences with food storage in a meatsafe (mesh-covered food storage cabinet) in an informal settlement in Dhaka, Bangladesh

Musarrat Jabeen Rahman, Syeda Nurunnahar, Mahbubur Rahman, Laura H Kwong, Peter J Winch

Mycobacterium tuberculosis transmission from tuberculosis patients with and without recognized symptoms: a case-contact study in eastern China

Cheng Chen, Xinsong Hu, C Robert Horsburgh, Wenjuan Wu, Chi Chen, Yan Shao, Hui Jiang, Zhuping Xu, Jun Jiang, Qiao Liu, Wei Lu, Limei Zhu, Leonardo Martinez

Enhancing epidemic forecast usability for policymakers: A global mixed-methods study

Paula Christen, Loice Achieng Ombajo, Anne Cori, Jeanette Dawa, Bimandra A Djaafara, Teresia Njoki Kimani, Camille MJ Schneider, Sabine L van Elsland, Mwangi Thumbi, Maria Veras, Charles Whittaker, Lilith K Whittles, Oliver J Watson

First Therapeutic Efficacy Study (TES) in Djibouti: A Critical Milestone Amid Rising Regional Threats

Sinknesh Wolde Behaksra, Samatar Kayad Guelleh, Solomon Sisay, Yisihak Abreham Weldehana, Daniel Mussa Weyesa, Tirhas Endale, Assia Adlao Hamad, Natnael Lemessa Hundera, Dawit Hailu Alemayehu, Elias B Tafa, William Louie, Andres Aranda-Diaz, Meklit Shiferaw, Matiwos Kidane Ayele, Fikregabrail Aberra Kassa, Dagim Hailegebrel Lakew, Amanuel Shimelash, Betelhem Akililu Kebede, Melat Abdo, Migbaru Keffale, Yahya Osman Moussa, Tesfaye Sisay Tessema, Bryan Greenhouse, Abdoulilah Ahmed Abdi, Bouh Abdi Khaireh, Fitsum G Tadesse

Assembly and Reactions of Artificial Metalloenzymes in Streptomyces albus

Sukriyo Chakraborty, Soonkyu Hwang, Jing Huang, Dongping Chen, Yan Chen, Christopher J Petzold, Douglas S Clark, Aindrila Mukhopadhyay, Jay D Keasling, John F Hartwig

Safely managed drinking water service use and child diarrhoea based on evidence from 24 countries

Esther E Greenwood, Mathilda Freymond, Andreas Scheidegger, Thomas Lauber, Kamshat Tussupova, Amy J Pickering, Timothy R Julian

Malaria in Children at 9 US Hospitals: 2016–2023

Sesh Alexander Sundararaman, Brianne Roper, Amy KF Davis, Karen L Hanze Villavicencio, Jonathan A Mayhew, Michelle L Wang, Nina L Tang, Vijaya L Soma, Ziyi Wang, Margaret E Feeney, Indi Trehan, Jill E Weatherhead, Chandy C John, Jeffrey S Gerber, Audrey R Odom John

Congenital cytomegalovirus infection drives oligoclonal expansion of cytotoxic γδ T cells from early fetal progenitors

Justine Levan, Anna V Vaaben, Jessica Tsui, Brittany R Davidson, Meagan E Olive, Perri C Callaway, Catherine BT Nguyen, Mikias Ilala, Ravi K Patel, Riana D Hunter, Gabriela K Fragiadakis, Alexis J Combes, Felistas Nankya, Grant Dorsey, Abel Kakuru, Mary Muhindo, Margaret E Feeney

Target product profiles of laboratory and data analytical frameworks for genotyping to monitor antimalarial efficacy

Mateusz M Plucinski, Amy Wesolowski, Inna Gerlovina, Aimee R Taylor, Jessica Briggs, Andrés Aranda-Díaz, Monica Golumbeanu, Marko Bajic, Jeffrey A Bailey, Joel LN Barratt, Caroline Buckee, Awa B Deme, Ingrid Felger, Anita Ghansah, Ian Hastings, Johanna Helena Kattenberg, Alfredo Mayor, Didier Menard, Leah F Moriarty, Daniel Neafsey, Lucy Okell, Isabella Oyier, Jaishree Raman, Philip J Rosenthal, Anna Rosanas-Urgell, Robert Verity, Sarah K Volkman, Christian Nsanzabana, Bryan Greenhouse

Cross-clade vaccination to overcome sarbecovirus or merbecovirus neutralization gaps

Wan Ni Chia, Feng Zhu, Samuel Mo Sheng Cheng, Wee Chee Yap, Abeer N. Alshukairi, Yun Yan Mah, Mayfong Mayxay, Vilada Chansamouth, Andrew Letizia, Beng Lee Lim, Yidan Wang, Madeline Sheng Si Kwek, Tierra Smiley Evans, Ohnmar Aung, Hlaing Myat Thu, Christine K. Johnson, Yanqun Wang, Jincun Zhao, Jessica E. Manning, Christina Yek, Chanthap Lon, Seng Heng, Sovann Ly, Rithea Leang, Rekol Huy, Aghnianditya Kresno Dewantari, Frilasita Aisyah Yudhaputri, Khin Saw Aye Myint, Matthew P. Rubach, John A. Crump, Venance P. Maro, Nicole J. Moreland, Aimee Paterson, Richard Charlewood, Jingjing Song, Shiwei Chen, Wan Yi Tan, Chris Ka Pun Mok, Catherine Hong Huan Hor, David Lye, David SC. Hui, Barnaby E. Young, Malik Peiris, Lin-Fa Wang, and Chee Wah Tan.

Modified Anti-PstS1 Bi-specific antibodies unlock potent protection against tuberculosis

Akanksha, Rania Bouzeyen, Avia Watson, Gil Wiseglass, Nyaradzai Sithole, Lilach Abramovitz, Noam Ben-Shalom, Rotem Rubinstein, Babak Javid, Natalia T Freund

Prior contact lens wear reduces susceptibility of the superficially-injured cornea to bacterial adhesion

Yujia Yang, Orneika Flandrin, Sara J Abboud, Eric Jedel, David J Evans, Suzanne MJ Fleiszig

Dengue transmission risk in California under climate and land-use change: a semi-mechanistic modelling study

Lisa I Couper, Terrell J Sipin, Samantha Sambado, Zoe Rennie, Kyle M Shanebeck, Kelsey P Lyberger, Philip PA Collender, Van Ngo, Justin V Remais, Andrew J MacDonald