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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

Improving Fidelity of Implementation of Self-administered Pulse Oximetry and Remote Patient Monitoring in Honduras during the COVID-19 Pandemic

Kathryn  W. Roberts, Berta Alvarez, Michael de St. Aubin, Omar Diaz, Salome Garnier,  Rachel See,  Saul Cruz, Lorenzo Pavon, Anthony D. So, Ligia Paina, Tara Kirk Sell, Shiony Midence, Angela Amador Ochoa, Homer Mejia Santos, Jonathan Ochoa, Sogeiry Solis, Devan Dumas, Margaret Baldwin, C. Daniel Schnorr, Alcides Martinez, Avi J. Hakim, Eric Nilles

Mass school testing for Mycobacterium tuberculosis infection and disease in an adolescent population: A prospective cohort from eastern China

Qiao Liu, Zhan Wang, Wenjin Wang, Wenxin Jiang, Peng Lu, Xinru Fei, Tenglong Li, Limei Zhu, Juan Wen, Wei Lu, Leonardo Martinez

Impaired IFNγ responsiveness of monocyte-derived lung cells limits immunity to Mycobacterium tuberculosis

Weihao Zheng, Jason D Limberis, Zachary P Howard, Alexander Mohapatra, Enzo Takagi, Joel D Ernst

Estimating probabilities of malaria importation in southern Mozambique through modelling P. falciparum genomics and mobility patterns

Arnau Pujol, Arlindo Chidimatembue, Clemente da Silva, Simone Boene, Henriques Mbeve, Pau Cisteró, Carla García-Fernández, Arnau Vañó-Boira, Dário Tembisse, José Inácio, Glória Matambisso, Fabião Luis, Nelo Ndimande, Humberto Munguambe, Lidia Nhamussua, Wilson Simone, Andrés Aranda-Díaz, Manuel García-Ulloa, Neide Canana, Maria Tusell, Júlia Montaña, Laura Fuente-Soro, Khalid Ussene Bapu, Maxwell Murphy, Bernardete Rafael, Eduard Rovira-Vallbona, Caterina Guinovart, Bryan Greenhouse, Sonia Maria Enosse, Francisco Saúte, Pedro Aide, Baltazar Candrinho, Alfredo Mayor

Micro-costing for national-scale azithromycin mass drug administration to improve child survival in Niger

Brittany Peterson, William Nguyen, Laminou Maliki Haroun, Farissatou Oumarou, Ahmed M Arzika, Ramatou Maliki, Abdou Amza, Karamba Alio, Nasser Gallo, Bawa Aichatou, Ismael Issa Sara, Diallo Beidi, James G Kahn, Stefano M Bertozzi, Elodie Lebas, Benjamin F Arnold, Thomas M Lietman, Kieran S O’Brien, Meagan C Fitzpatrick, AVENIR Study Group

Hyperiax and Phylogenetic Inference from Shape Data

Gefan Yang, Marcus Teller, Christy Hipsley, Rasmus Nielsen, Stefan Sommer

Toward an Open Analysis Ecosystem for Plasmodium Genomic Epidemiology

Shazia Ruybal-Pesántez, Jorge Amaya-Romero, Sophie Bérubé, Nicholas F Brazeau, Mouhamadou F Diop, Nicholas Hathaway, Jason A Hendry, Kirsty McCann, Kathryn Murie, Maxwell Murphy, Karamoko Niaré, Jody Phelan, Stephen F Schaffner, Alfred Simkin, Aimee R Taylor, Bryan Greenhouse, Amy Wesolowski, Robert Verity

AutoBlot: deterministic single-cell western blotting reveals proteomic diversity in rare cell populations

Cyril Deroy, Md Nazibul Islam, Nadine Goldhammer, Lorraine Jiang, Jennifer M Rosenbluth, Amy E Herr

From the Laboratory to the Field: Assessing the Usability of the NTDscope in the Tropical Rainforest Region of Gabon

Rella Zoleko Manego, Lillian Rene Endamne, Victor Pahl, María Díaz de León Derby, Ghyslain Mombo-Ngoma, Daniel A Fletcher, Isaac I Bogoch, Michael Ramharter, Saskia Dede Davi

Longitudinal antibody profiling after dengue reveals distinct dynamics by antibody specificity over 18 months

Sandra Bos, Tulika Singh, José Victor Zambrana, Elias Duarte, Reinaldo Mercado-Hernandez, Julia Huffaker, Aaron Graber, Angel Balmaseda, Eva Harris

Identification of UCB-9721 as a potent inhibitor of MyoA, the essential class XIV myosin motor of apicomplexan parasites

Anne K Snyder, Filomena Tedesco, Anne Kelsen, Eddie Wehri, Binod Nepal, Jose Teixeira, Emmett Dews, Sachie Kanatani, Kyle Kasprzak, Jonathan Oliva, Kaesi Morelli, Samantha Beck Previs, Bruno Martorelli di Genova, Fran Sverdrup, Martin J Boulanger, Photini Sinnis, Christopher D Huston, Sandhya Kortagere, David M Warshaw, Julia Schaletzky, Nicholas J Westwood, Gary E Ward

Unified climate factors predict influenza outbreak seasonality across tropical and temperate regions

Aleksandra R Stamper, Wenchang Yang, Caroline E Wagner, Ayesha S Mahmud, Rachel E Baker

TRPV1 impacts O-glycosylated surface mucin distribution on the mouse corneal epithelium

Sara Abboud, Yujia Yang, Nathanael Harrison, Benjamin Smith, Namrita Naveen, Matthew Naidu, Irene L Chen, Stacy Malaker, David J Evans, Suzanne MJ Fleiszig

Corneal Neuroimmune Signatures of Childhood Adversity Identified Using Time-Lapse In Vivo Confocal Microscopy

Luisa H Colorado, Kerri Gillespie, Katie Edwards, David J Evans, Suzanne MJ Fleiszig, Selena F Bartlett

Sustained high prevalence of multiple antimalarial drug resistance markers in Uganda in 2023–2024

Thomas Katairo, Victor Asua, Francis D Semakuba, Bienvenu Nsengimaana, Shahiid Kiyaga, Nicholas Hathaway, Kathryn Murie, Stephen Tukwasibwe, Innocent Wiringilimaana, Jackie Nakasaanyaa, Caroline Mwubaha, Karen B Achom, Trevor E Esilu, Alisen Ayitewalah, Monica Mbabazi, Kisakye D Kabbale, Jerry Mulondo, Eric Watyekele, Andrés Aranda-Diaz, Catherine S Maiteki, Jimmy Opigo, Grant Dorsey, Samuel L Nsobya, Moses R Kamya, Bosco B Agaba, Isaac Ssewanyana, Bryan Greenhouse, Philip J Rosenthal, Jessica Briggs, Melissa D Conrad

Acceptability and appropriateness of remote monitoring and self-administered pulse oximetry among COVID-19 patients in Honduras: a mixed-methods study

Kathryn W. Roberts, Berta Alvarez, Omar Diaz, Michael de St Aubin, Salome Garnier, Saul Cruz, Lorenzo Pavon, Angela Ochoa, Sogeiry Solis, Shiony Midence, Homer Mejía Santos, Jonatan Ochoa, Devan Dumas, Margaret Baldwin, C Daniel Schnorr, Alcides Martinez, Ligia Paina, Eric Nilles

Apollo 3: Multi-Species Genome Curation

Garrett J Stevens, Kyösti Sutinen, Dario Beraldi, Shashank Budhanuru Ramaraju, Colin Diesh, William Haese-Hill, Peter Xie, Caroline Bridge, Adrien Morison, Angel Leung, Ulrike Böhme, Scott Cain, Nathan Dunn, Toby Hunt, Jane E Loveland, Adam Frankish, Alexie Papanicolau, Stefano Giorgetti, Jon Keatley, Bethany Flint, Lincoln Stein, Robert Buels, Matt Berriman, Ian Holmes

Foodborne sources of antimicrobial-resistant Escherichia coli in community-acquired urinary tract infections in Bangladesh

Mohammed Badrul Amin, Brandon M Flatgard, Kazi Injamamul Hoque, Rizwana Khan, Md Rayhanul Islam, Mahdia Rahman, Eva Raphael, Mohammad Aminul Islam

Targeted Transcriptional Repression by Induced Proximity

Christian E Stieger, Xinru Chen, Christina C Kuismi, Dustin Dovala, Daniel Fuller, Andreas O Frank, Mikias Woldegiorgis, Megan Bruce-Smythe, Fabian Wu, Nicolas Pizzato, Jeffrey McKenna, Cory Johannessen, Barna D Fodor, Markus Schirle, Daniel K Nomura