Hao Zhang, Daqiang Li, Hao-Chi Hsu, Akshay Vishwanatha, Wenhu Zhan, Takafumi Yukawa, Joseph Visone, Toshihiro Imaeda, Rei Okamoto, Pavla Fajtova, Ryoma Hara, Masanori Kawasaki, Kenjiro Sato, Mayako Michino, Shreeya Garg, Oriana Kreutzfeld, Patrick K Tumwebaze, Stephen Orena, Martin Okitwi, Kazuyoshi Aso, Roland A Cooper, Philip J Rosenthal, Peter T Meinke, Michael Foley, Anthony J O’Donoghue, Huilin Li, Laura A Kirkman, Gang Lin
Publications
CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

ORC binding to Heterochromatin Protein 1 through intrinsically disordered regions is required for heterochromatin structure and function
Yuchang Luo, Srivarsha Rajshekar, Harish Kumar, James M Berger, Gary H Karpen, Michael R Botchan
Bead-free deterministic DNA barcoding using vacuum-driven loading of aqueous oligonucleotides to microwell arrays
Patrycja Baranowska, Trinh Lam, Amy E Herr
Structure and evolution-guided design of minimal RNA-guided nucleases
Petr Skopintsev, Isabel Esain-Garcia, Evan C DeTurk, Peter H Yoon, Zehan Zhou, Trevor Weiss, Maris Kamalu, Ajit Chamraj, Kenneth J Loi, Conner J Langeberg, Ron S Boger, Hunter Nisonoff, Hannah M Karp, Lin-Xing Chen, Honglue Shi, Kamakshi Vohra, Jillian F Banfield, Jamie HD Cate, Steven E Jacobsen, Jennifer A Doudna
A playbook for harmonization of standards for emergent viral pathogens
Sara Suliman, Sebastien Fuchs, David Catoe, Loren Hansen, Deepa Eveleigh, Michael A Crone, Paul S Freemont, Martin Kammel, Heinz Zeichhardt, Andrew T Anfora, Russell Garlick, Neil Almond, Mark Page, Brian Beck, Hui Wang, Karuna Sharma, Gary Pestano, Joannes Vancann, Jo Vandesompele, Adam S Corner, Jeffrey Albrecht, Deborah J Boles, Marcia Eisenberg, Ayla B Harris, Brian J Krueger, Amanda L Suchanek, Thomas J Urban, Jonathan D Williams, Patrick Chain, Alina Deshpande, Attelia Hollander, Sujata Chalise, David R Walt, Jeffrey Germer, Joseph D Yao, Bobbi S Pritt, Frederick S Nolte, Alexandra Bogožalec Košir, Mojca Milavec, Megan H Cleveland, Peter M Vallone, Eloise J Busby, Jim F Huggett, Denise M O’Sullivan, Elizabeth M Marlowe, Benjamin A Pinsky, Annaleise Kealiher, Jeantine E Lunshof, Christopher E Mason, John Sninsky, Cristina Tato, Timothy Mercer, Thomas J White, Marc Salit
Stochastic phylogenetic models of shape
Sofia Stroustrup, Morten Akhøj Pedersen, Frank van der Meulen, Stefan Sommer, Rasmus Nielsen
SSRI prescription during acute COVID-19 and risk of Long COVID symptoms and conditions among patients with depression
Zachary Butzin-Dozier, Yunwen Ji, Lin-Chiun Wang, Manav Kumar, A Jerrod Anzalone, Eric Hurwitz, Ariana Budhihartanto, Rena C Patel, Alan Hubbard, Jodi Halpern
Redox-activated cholesterol-dependent cytolysin enables cytosolic release of liposomal cargo
Seonhye Jang, Kundansingh Pardeshi, Suyeon Shin, ByeongJun Jeong, Sheng Zhao, Yalin Qi, Sung Tae Kim, Min Chul Park, Niren Murthy, Hansol Kim
How proteins fold
Carlos Bustamante, Christian M Kaiser, Erik Lindahl, Robert Sosa, Giovanni Volpe
Performance of an artificial intelligence model for evaluation of unnecessary central lines, Northern California 2025
Jenna M Wick, Apoorva Bhaskara, Wajeeha Tariq, Sean Lau, Mindy M Sampson, Jorge L Salinas
Design and characterization of 4D-710, an aerosolized gene therapy for cystic fibrosis lung disease
Melissa A Calton, Roxanne H Croze, Theodore H Sullivan, Sara A Collins, Sarah Tucker, Kevin J Whittlesey, Daniel H Kim, Julie A Nye, Ghezal Beliakoff, Melissa Quezada, Christian Burns, Chris Schmitt, Austin Klein, Vicky Jia, Laura Kovacs, Domokos Lauko, Kathryn Yoh, Kien Nguyen, Katherine Barglow, Johnny Gonzales, Devi Khoday, Thomas Mason, Kathy Delaria, Keenan Bashour, Melissa Kotterman, David Schaffer, An Song, Peter Francis, Jennifer L Taylor-Cousar, David Kirn
Evaluating the impact of antiviral post-exposure prophylaxis for health-care workers during ebolavirus outbreaks: a modelling study
Jacob N Stapley, Youngsuk Ko, Geetha Jeyapragasan, Elana MG Chan, Abel W Walekhwa, Cathal Mills, Christophe Fraser, Arthur L Reingold, Dav Ebengo, Christl A Donnelly, Placide K Mbala, Charles Whittaker
Estimating the Quality-Adjusted Life-Year Loss due to Fatal and Nonfatal COVID-19 Outcomes across US States and Counties, July 2020 to December 2022
Fatima Mikdashi, Rachel E Murray-Watson, Rafael Lopes, Alyssa Bilinski, Reza Yaesoubi
Black Patients Underdiagnosed With Long COVID In The US Compared With White Patients: Article examines Long COVID diagnosis for black patients and white patients
Zachary Butzin-Dozier, Yunwen Ji, Sarang Deshpande, A Jerrod Anzalone, Lin-Chiun Wang, Eric Hurwitz, Manav Kumar, Rena C Patel, Jing Sun, McKaylee Robertson, Andrew Mertens, Marlene Camacho-Rivera, John M Colford, Alan Hubbard, Charisse Madlock-Brown
Principal Components Analysis fails to recover phylogenetic structure in hominins
Levi Y Raskin, Maja Šešelj, Bárbara D Bitarello, Sofia Stroustrup, Jacky K Li, John Huelsenbeck
The lung tissue environment in Mycobacterium tuberculosis infection determines local monocyte differentiation
Mohapatra A, Zheng W, Qiu L, Looney MR, Ernst JD
The Immunophenotype and proviral landscape of HIV-infected CD4 T cells during antiretroviral therapy
Cyrille L Delley, Sakshi Shah, Kevin M Joslin, Yujung P Park, Benjamin Demaree, Michael P Busch, Mars Stone, Steven G Deeks, Eli A Boritz, Adam R Abate, Iain C Clark
Harmonizing standards and resources for the medical genome
Euan A Ashley, Ash A Alizadeh, Hanae Armitage, Ami S Bhatt, Yair Blumenfeld, Andrew Carroll, R Martin Chavez, Petros Giannikopoulos, Megan E Grove, Meghan C Halley, Kiran Khush, Niall J Lennon, Samantha Maragh, Alexander Marson, Benedict Paten, Adam M Phillippy, Matthew H Porteus, Heidi L Rehm, Bradley R Ringeisen, Julia Salzman, Valerie A Schneider, Fritz J Sedlazeck, Lars M Steinmetz, Fyodor D Urnov, Stacia K Wyman, Justin M Zook, Lloyd B Minor, Jennifer A Doudna
Costs and impacts of vaccine preparedness investments for SARS-X pandemics
Patrick Doohan, Peter Windus, Andrew Torkelson, Damian Walker, Charles Whittaker, Gemma Nedjati-Gilani, Christian Morgenstern, Guillaume Morel, Marisa Miraldo, Giovanni Forchini, Fatima Docrat, Saul Walker, Dimitrios Gouglas, Alice Sabino, Katharina Hauck
Development and analytical validation of a fluorescent recombinase polymerase amplification-assay for real-time detection of Phyllosticta citricarpa, the causative agent of Citrus Black Spot
Federico La Spada, Rossana Parlascino, Mario Riolo, Sebastiano Conti Taguali, Antonella Pane, Matteo Garbelotto, Bryant Davenport, Marcos Amato, Santa Olga Cacciola
